dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002789_11|CGC1
Gene ID: MGYG000002789_01573
Location and strand information: 1813 - 3102 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5178
Protein molecular weight: 47259.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002789_11|CGC1
Gene ID: MGYG000002789_01574
Location and strand information: 3237 - 4247 (+)
Family: LacI
Protein type: TF
Protein description: putative HTH-type transcriptional repressor ExuR

Gene clsuter ID: MGYG000002789_11|CGC1
Gene ID: MGYG000002789_01575
Location and strand information: 4265 - 5131 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002789_11|CGC1
Gene ID: MGYG000002789_01576
Location and strand information: 5499 - 7046 (+)
Family: 2.A.2.5.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002789_11|CGC1
Gene ID: MGYG000002789_01577
Location and strand information: 7076 - 8197 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.1879
Protein molecular weight: 43220.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002789_01573	hypothetical protein	CAZyme	1813	3102	-	GH28
MGYG000002789_01574	putative HTH-type transcriptional repressor ExuR	TF	3237	4247	+	LacI
MGYG000002789_01575	hypothetical protein	null	4265	5131	+	AP_endonuc_2
MGYG000002789_01576	hypothetical protein	TC	5499	7046	+	2.A.2.5.1
MGYG000002789_01577	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	7076	8197	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature